AutoAnnotate Cytoscape App 1.1

User Guide

• Getting Started (Installing)
  • Requirements
  • Installation
• Creating an Annotation Set
  • Create Annotation Set Dialog
  • ClusterMaker2 Algorithms
• Working With AutoAnnotate
  • Panels
  • Changing Display Options
  • Managing Annotation Sets
  • Managing Clusters in the Side Panel
  • Managing Clusters in the Network View
  • Collapsing and Expanding Clusters
  • Summary Network
  • Working with WordCloud
  • Saving and Restoring a Session with Annotation Sets
  • Additional Options
• Bug Reports and Enhancement Requests

Links

• Cytoscape.org
• Cytoscape App Store
• Baderlab.org
• GitHub